Browse of TCMCG042C58741 protein

CDS

Accession Number	TCMCG042C58741
gbkey	CDS
Protein Id	XP_016490877.1
Location	join(51859..51999,52938..53033,54313..54387,57517..57621,57704..57814,58257..58416,59622..59707,60224..60346,60424..60654,63752..63841,64089..64250,66945..67061,67166..67372,68372..68473,68584..68715,69104..69234,69333..69452,69601..69736,69935..70132,72187..72305,72641..72791,76143..76255,76339..76420,76600..76686,76799..76876,77003..77206,78743..78835,78915..79028,79173..79343,79451..79506,79581..79653,79753..79943,80037..80163,80297..80374,84175..84336,85924..86094,86168..86305,88723..88866,89031..89153,89271..89366,89520..89657,89772..89872,90665..90784,90859..90958,91780..91863)
Gene	LOC107810594
GeneID	107810594
Organism	Nicotiana tabacum

Protein

Length	1878aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA319578
db_source	XM_016635391.1
Definition	PREDICTED: nuclear pore complex protein NUP205 [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Nuclear pore complex scaffold, nucleoporins 186/192/205
KEGG_TC	1.I.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K14310        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005198        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005643        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006913        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0006997        [VIEW IN EMBL-EBI] GO:0006999        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0017056        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043933        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0044611        [VIEW IN EMBL-EBI] GO:0046907        [VIEW IN EMBL-EBI] GO:0051169        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051641        [VIEW IN EMBL-EBI] GO:0051649        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTTTCTGCGAAGAATTTGTTATCATTAATCGAATCTACCTTATTGGGACCCACCCCTCCTACGCCATCGCAGCGGATTGAGCTGCTTCACGCCATTCGTCATTCTCTTCCTTCTCTTCAAAACCTACTTTCCTATCCGCCCCCCAAACCCTCGGACCGAGTTCAAGTCCAGTCCAAAGAAGTGAGGCTTCCGGATTCTGGGCCAATCTCACTGGATGATCAGGATGTTCAAATTGCCCTGAAGTTGAGTGATGATCTACATCTTAATGAAATAGACTCTGTTCGGTTGCTTGTTTCTGCCAACCAAGAGTGGGGATTATTGGGACGTGAGCCATTAGAGATATTCCGCCTTGCAGCTGGACTGTGGTATACAGAGAGAAGAGATCTTATAACAGCACTTTACACACTGTTGAGGGCTGTTGTCCTTGACCAAGGACTTGAACCTGATCTTGTGGCAGATGTTCAGAGATTTTTGGACGATCTCATTAATGCTGGAGTTAGAAAGCGGTTGATTTCTCTCATAAAGGAACTCAATCGCGAGGAACCAGCCGGTTTGGGGGGGCCTAACTGTGAACGCTATATTCTTGATTCAAGAGGAGCATTGGTGGAAAGGAGGGCTGTTGTTTCCAGGGAAAGGCTCATTCTGGCTCATTGCCTTGTCCTTTCTGTTTTGGTTGTCCGTGCAAGCCCTAAAGATGTGAAGGATGTCTTTTCTGCTCTAAAGGATAGTGCAGCAGGGCTTAGTGGTGGCACTGACACTTTAAGGCATCAGATAACATATAGTCTTCTCTTCTCTCTTGTGGTGGCCCTCATATCAGATGCATTGAGTGCAGTACCTGATAAAACATCTGTCTTGTCTCGTGATGCTTCCTTTAGACATGAATTCCAGGAATCTGTAATGGTCGCCGGGAAAGATGCTGTTGTTGAGGGCTATGTTGATTGCTTAAGGAGTTCGTGGGTTGTACATCTAATGTTAATACATGACGGGCTTGATGCAAAAGACACAGCAGCAAGTGCTTCGTCAAATAATGATATAAGGAACATCTATTCATGCTTGGAAGTTATATTCTCCAACAATGTCTTCCAGTCTTGGCTGAATAAGATCCTCCTAACTCCTGCCTATCAGAATGACGATGAGGATATGATCTACATGTACAATGCTTATTTGCACAAGATGATAACTTGCCTTTTGTCTCATCCACTGGCCAAGGACAAGGTTAAAGAAGCAAAAGAGAAGGCTATGTCGGCACTTAGTCCGTACCGCTTGTCTACGTCACATGATTATACTGTGGATGGAATTGGACATTTTCAAAATGCCACTGAACCAGCGCCACAAACTTTTGTCTCTCTCTTGGAGTTTGTGAGTGAAATTTATCAGAGAGAACCCGAGTTGCTGTCTGGTAATGATGTTCTATGGACATTTGTCAACTTTGCCGGGGAGGATCACACTAACTTTCAAACACTTGTAGCATTTTTGAGAATGCTGAGTACCTTGGCTTCTAGTGCTGAGGGTGCTTCCAAAGTTTTTGAGTTACTTCAGGGAAAGACATTCCGTTCTATCGGATGGAGCACTTTATTTGATTGTTTATCAATTTATGAGGAAAAGTTCAAACAAGCTGTGCAAAGTCCTGGCGCAGTTTTGCCAGAGATACAGGAAGGAGATGCCAAAGCACTTGTTGCTTACTTGAATGTTCTGCAGAAGGTTGTTGAAAACGCGAATCCCGTAGAAAGGAAGAATTGGTTCCCTGATATCGAGCCGTTGTTCAAGCTCCTTGGTTATGAAAATGTCCCTCCCTATCTTAAGGGTGCATTAAGAAATGCGATAGCTACTTTTGTTCAAGTATCACCAGTTATGAAAGATACAACTTGGAGGTATTTAGAGCAATATGATCTACCTGTAGTTGTTGGGAATACAACACAACCCTTGACAACACAGGTTTATGATATGCGATTTGAGCTGAATGAAATAGAAGCTAGAAGGGAGCAATATCCTTCAACTATATCATTCATTAACTTGTTGAATACACTTATTGCCGCTGAAAAGGATGTTAGTGATAGAGGGCATAGATTCATTGGCATCTTTAAATTCATTTATGATCATGTCTTTGGGCCATTCCCACAGAGAGCTTATGCTGATCCGTGTGAAAAGTGGCAACTTGTCATAGCTTGCCTCAAACATTTCCAGATGATGCTGAGCATGTATAGTATCAGAGATGAGGATATTGACAGTGTCGTGGACCAATCTCAGCTATCAGAAGCAGGGCAATCTACGCCGCTGCAGATGCAGCTGCCTATGCAGCTGCCTTTAATAGAATTGATGAAAGATTTTATGAGTGGTAAAACAGTGTTTTGGAATATCATGAGTATTCTTTCACCAGGAGTCAATTATCTAATCGGTGAACGAACAAGTCAAATTTACGGGCAACTTCTTGAAAAAGCTGTCCTGCTTTCTCTGGAAATTGTAAATCTCGTATTGGAGAAAGATTTAGCTGTGTCTGATTTTTGGCGTCCTTTGTATCAACCTCTGGATGTCATTCTCTCACAAGATCAGAACCAAGTTGTGGCTTTATTGGAGTATGTCAGATATGATTTGCAGCCCCGTGTTCAACAATCCTCTATCAAAATAATGAACATCCTAAGTTCTCGCATGGTTGGACTTGTTCAGTTGCTCATAAAATCCAATGCTGCAGGGAGCTTGATTGAGGATTATGCTGCCTGCTTAGAGCTGCGATCTGAAGAATGTCAAATTATTGAGGACTCCCGTGAAGATTCAGGTGTTCTCATACTGCAACTACTTATTGATAATATTAGCCGGCCTGCCCCGAATATCGCACATCTATTACTCAAATTTGATGTTGATAGCCCTGTGGAGAGGACCATGCTTCAGCCAAAATTTCACTATAGTTGCTTGAAGGTCATTCTTGATGTGATGGAGAATCTTTTGAAGACTGATGTCAATGCTTTGCTCCATGAATTTGCATTTCAGCTTCTTTATGAGTTATGTACAGATCCCCTGACTTGTGGTCCTATGATGGATTTGTTAAGCACCAAAAAGTATTGGTTTTTTGTGAAGCATCTGGATATAATTGGTATTGCTCCACTACCCAAAAGGAATAGTAGTCAGGCACTTCGCGTCAGTTCCCTTCATCAGAGAGCATGGCTGTTGAAGCTGCTAACAGTAGCATTACATGCGGCTGATATGTCTAGTTCCACCCATCGAGAAGCTTGTCATAGTATCTTATCTCAATTATTTGGGGACGGAATTTTTGAATATGATGCTGATCTCGGTGTATCTTCTCCCAATCATCAAAGCAGTCCTGCAATGAATGGAGCCAGAATGATTAGTAAGGCTAAGGTATTGGAGTTGCTTGAAGTTGTCCAGTTTAAATCTCCTGATACTTTGTTGAAATCTTCACAAGCTGTTTCGAGCGCGAAATATGGGTTTCTGGCTGAAGATATACTTACCAATCCTGCTACTTCTGAAAAAGGTGGTGTTTACTATTACTCAGAGCGTGGAGACCGTTTAATTGATCTAGCTGCATTTCGTGACAAATTATGGCAGAAGTACAACTTTTTTGATCCCCAGAATAGCTCCTTTAATGGTGAAGTTGAGCTTAATGAAATTCGAGATACAATTCAACAACTGTTACGATGGGGTTGGAGATACAACAAAAATCTTGAAGAACAAGCAGCTCAGCTTCATATGTTAACTGGCTGGTCTCAAATTGTTGAGGTCTCGGCCTCCAGAAAAATATCCTCTCTTCCCAACCGTTCTGAAATATTATTTCAGTTGCTAGATGCTTCTCTCAGTGCTTCTGGTTCTCCTGACTGTTCATTGAAGATGGCACTGATATTGACGCAGGTTGGTCTCACATGCATGGCCAAGCTACGTGATGAAAGGTTCTTATGCCCTAGTGGTTTAAACAATGATACTGTCACTTGTCTTGACATCATGATGACAAAACAATTATCGAATGGAGCATGCCACTCTATTCTATTCAAGCTCATACTAGCAATTCTTAGAAACGAATCATCAGAAGCATTGAGGAGGCGCCAATACGCTTTGCTCCTTAGCTATATCCAGTACTGTCAGCATATGCTTGATCCTGATCTTCCAACCACAGTTCTGCAATTATTGACAATGGATGAACAGGAAAATGGAGATCTGGATCTGGAAAAGATTGTCAAAGATCAGTCTGAAATGGCACATGCAAATTTTTCAATAATAAGGAAGGAAGCTCAATCACTTCTAGATCTGATCATAAAAGATGCAACCCATGGCAGTGAATCTGGAAAGACTATCTCGCTCTATGTTTTGGATGCTTTAATTTGCATTGATCATGAAAAGTTTTTCTTGAGCCAACTGCAAAGCAGAGGCTTTTTGAGGTCTTGTCTTGTGAGCATCAATAACTTTTCTCAGGATGGTGGGCTATCTTTGGAGTCAATGCAGCGTGTCTGCACTCTTGAAGCTGAACTTGCTCTTCTTCTGAGAATTAGCCACAAGTATGGGAAATCAGGGGCCCAAGTGCTTTTTTCAATGGGTGCATTCGAGCATATTTCTGCCTGTAGGGCACTGAGTATGCAATTGAAGGGAAGCTACCGGCGCTTGGATGGAAAATTTGGAAGAGAATTGTCAGTTGATGTTGATAAACAACGAATGATCATTGCTCCAATCATGAGAGTGGTGTTTTCACTTACTTCATTAGTTGATGCATCTGAATTTTTTGAGGTTAAAAATAAAGTTGTCCGTGAAGTCATTGAATTTGTAGGAGGTCATCAATTACTTTTTGATCAAATCCTTCGAGAAGATCTTTCTGATGCTGATGACTTGACAATGGAACAAATAAATCTGGTGGTTGGCATACTTACAAAGATCTGGCCATATGAAGAGAGTGATGAATATGGTTTTGTTCAAGGGCTTTTTGTGATGATGCGTTTTCTTTTCTCTAGTGATCCAGACTCTTTTATTACAAACCAATCCATACGTTTTCTGGAGGAAAGGCGGAAGGCAGAAGTGAATGCTTCTCGTCTGTGCTTTAGCCTGAGCGCTTATCTCTGTTTTCTTGTAACGAAGAAGTCTTTAAGATTGCCGGTCTCAGATGGTCCGATGGACTATCGTGCTTCCGCTGCTCAGCAACAGCCAACCTTGAATTTACTTGGTTTTCTTCTGAACTCTCTGACTACAGCATTGGAAAGGGCTACGGAGGACAGATATTTACTGCTTAGCAAGCTCCAAGATATAAATGAATTATCAAGACAGGAAGTGGATGAAATCATTAACATGTGTATTCCCAAGGGCTGTATTTCGTCATCTGAAAACATTCAGAAAAGGAGATATATTGCAATGGTGGAGATGTGCCAGATTATTGGAGATAGGAATAAACTGATGACACTATTACTTTTACTGGCGGAAAATGTGATGAATATTATCCTTCTCCATTTTCAGGACAGTTCTTTTGAATGTGGCACCAAACCATACGCAAAAGACGACTTGAATTTACTTTGTGGAAAGTTAATCTCAGCTTTGGAGAGGCTTGAACTTTTAAGCGAGGATAAAACAGGTCATGACCTTAAGGTGTTCCGAAGATTAGCTAGTTCTCTGAAAGAAATATCGATTCAGAAGTCACCTGTTTGA

Protein:   MVSAKNLLSLIESTLLGPTPPTPSQRIELLHAIRHSLPSLQNLLSYPPPKPSDRVQVQSKEVRLPDSGPISLDDQDVQIALKLSDDLHLNEIDSVRLLVSANQEWGLLGREPLEIFRLAAGLWYTERRDLITALYTLLRAVVLDQGLEPDLVADVQRFLDDLINAGVRKRLISLIKELNREEPAGLGGPNCERYILDSRGALVERRAVVSRERLILAHCLVLSVLVVRASPKDVKDVFSALKDSAAGLSGGTDTLRHQITYSLLFSLVVALISDALSAVPDKTSVLSRDASFRHEFQESVMVAGKDAVVEGYVDCLRSSWVVHLMLIHDGLDAKDTAASASSNNDIRNIYSCLEVIFSNNVFQSWLNKILLTPAYQNDDEDMIYMYNAYLHKMITCLLSHPLAKDKVKEAKEKAMSALSPYRLSTSHDYTVDGIGHFQNATEPAPQTFVSLLEFVSEIYQREPELLSGNDVLWTFVNFAGEDHTNFQTLVAFLRMLSTLASSAEGASKVFELLQGKTFRSIGWSTLFDCLSIYEEKFKQAVQSPGAVLPEIQEGDAKALVAYLNVLQKVVENANPVERKNWFPDIEPLFKLLGYENVPPYLKGALRNAIATFVQVSPVMKDTTWRYLEQYDLPVVVGNTTQPLTTQVYDMRFELNEIEARREQYPSTISFINLLNTLIAAEKDVSDRGHRFIGIFKFIYDHVFGPFPQRAYADPCEKWQLVIACLKHFQMMLSMYSIRDEDIDSVVDQSQLSEAGQSTPLQMQLPMQLPLIELMKDFMSGKTVFWNIMSILSPGVNYLIGERTSQIYGQLLEKAVLLSLEIVNLVLEKDLAVSDFWRPLYQPLDVILSQDQNQVVALLEYVRYDLQPRVQQSSIKIMNILSSRMVGLVQLLIKSNAAGSLIEDYAACLELRSEECQIIEDSREDSGVLILQLLIDNISRPAPNIAHLLLKFDVDSPVERTMLQPKFHYSCLKVILDVMENLLKTDVNALLHEFAFQLLYELCTDPLTCGPMMDLLSTKKYWFFVKHLDIIGIAPLPKRNSSQALRVSSLHQRAWLLKLLTVALHAADMSSSTHREACHSILSQLFGDGIFEYDADLGVSSPNHQSSPAMNGARMISKAKVLELLEVVQFKSPDTLLKSSQAVSSAKYGFLAEDILTNPATSEKGGVYYYSERGDRLIDLAAFRDKLWQKYNFFDPQNSSFNGEVELNEIRDTIQQLLRWGWRYNKNLEEQAAQLHMLTGWSQIVEVSASRKISSLPNRSEILFQLLDASLSASGSPDCSLKMALILTQVGLTCMAKLRDERFLCPSGLNNDTVTCLDIMMTKQLSNGACHSILFKLILAILRNESSEALRRRQYALLLSYIQYCQHMLDPDLPTTVLQLLTMDEQENGDLDLEKIVKDQSEMAHANFSIIRKEAQSLLDLIIKDATHGSESGKTISLYVLDALICIDHEKFFLSQLQSRGFLRSCLVSINNFSQDGGLSLESMQRVCTLEAELALLLRISHKYGKSGAQVLFSMGAFEHISACRALSMQLKGSYRRLDGKFGRELSVDVDKQRMIIAPIMRVVFSLTSLVDASEFFEVKNKVVREVIEFVGGHQLLFDQILREDLSDADDLTMEQINLVVGILTKIWPYEESDEYGFVQGLFVMMRFLFSSDPDSFITNQSIRFLEERRKAEVNASRLCFSLSAYLCFLVTKKSLRLPVSDGPMDYRASAAQQQPTLNLLGFLLNSLTTALERATEDRYLLLSKLQDINELSRQEVDEIINMCIPKGCISSSENIQKRRYIAMVEMCQIIGDRNKLMTLLLLLAENVMNIILLHFQDSSFECGTKPYAKDDLNLLCGKLISALERLELLSEDKTGHDLKVFRRLASSLKEISIQKSPV